Index

A

add() (sed.core.metadata.MetaHandler method) add_attribute() (sed.core.SedProcessor method) add_energy_offset() (sed.core.SedProcessor method) add_features() (sed.calibrator.momentum.MomentumCorrector method) add_jitter() (sed.core.SedProcessor method) add_offsets() (sed.calibrator.energy.EnergyCalibrator method) add_processing() (sed.core.metadata.MetaHandler method) add_ranges() (sed.calibrator.energy.EnergyCalibrator method) adjust_energy_correction() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) adjust_ranges() (sed.calibrator.energy.EnergyCalibrator method) align_dld_sectors() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) append_delay_axis() (sed.calibrator.delay.DelayCalibrator method) append_energy_axis() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method)

append_k_axis() (sed.calibrator.momentum.MomentumCorrector method) append_tof_ns_axis() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) apply_correction() (sed.calibrator.momentum.MomentumCorrector method) apply_corrections() (sed.calibrator.momentum.MomentumCorrector method) apply_dfield() (in module sed.calibrator.momentum) apply_energy_correction() (sed.calibrator.energy.EnergyCalibrator method) (sed.core.SedProcessor method) apply_filter() (in module sed.core.dfops) apply_jitter() (in module sed.core.dfops) apply_momentum_calibration() (sed.core.SedProcessor method) apply_momentum_correction() (sed.core.SedProcessor method) attributes (sed.core.SedProcessor property) available_channels (sed.loader.flash.loader.FlashLoader property)

B

backward_fill_lazy() (in module sed.core.dfops) BaseLoader (class in sed.loader.base.loader) bin_and_load_momentum_calibration() (sed.core.SedProcessor method) bin_centers_to_bin_edges() (in module sed.binning.utils) bin_data() (sed.calibrator.energy.EnergyCalibrator method)

bin_dataframe() (in module sed.binning) bin_edges_to_bin_centers() (in module sed.binning.utils) bin_partition() (in module sed.binning) binned (sed.core.SedProcessor property) binsearch() (in module sed.binning.numba_bin) buffer_file_handler() (sed.loader.flash.loader.FlashLoader method)

C

calc_geometric_distances() (sed.calibrator.momentum.MomentumCorrector method) calc_inverse_dfield() (sed.calibrator.momentum.MomentumCorrector method) calc_symmetry_scores() (sed.calibrator.momentum.MomentumCorrector method) calibrate() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) calibrate_delay_axis() (sed.core.SedProcessor method) calibrate_energy_axis() (sed.core.SedProcessor method) calibrate_momentum_axes() (sed.core.SedProcessor method) cleanup_oldest_scan() (sed.loader.mirrorutil.CopyTool method) cm2palette() (in module sed.calibrator.momentum) complete_dictionary() (in module sed.core.config) compute() (sed.core.SedProcessor method) concatenate_channels() (sed.loader.flash.loader.FlashLoader method) config (sed.core.SedProcessor property)

coordinate_transform() (sed.calibrator.momentum.MomentumCorrector method) copy() (sed.loader.mirrorutil.CopyTool method) CopyTool (class in sed.loader.mirrorutil) correction_function() (in module sed.calibrator.energy) cpy() (sed.core.SedProcessor method) create_buffer_file() (sed.loader.flash.loader.FlashLoader method) create_dataframe_per_channel() (sed.loader.flash.loader.FlashLoader method) create_dataframe_per_electron() (sed.loader.flash.loader.FlashLoader method) create_dataframe_per_file() (sed.loader.flash.loader.FlashLoader method) create_dataframe_per_pulse() (sed.loader.flash.loader.FlashLoader method) create_dataframe_per_train() (sed.loader.flash.loader.FlashLoader method) create_multi_index_per_electron() (sed.loader.flash.loader.FlashLoader method) create_multi_index_per_pulse() (sed.loader.flash.loader.FlashLoader method) create_numpy_array_per_channel() (sed.loader.flash.loader.FlashLoader method)

D

dataframe (sed.core.SedProcessor property) define_features() (sed.core.SedProcessor method) DelayCalibrator (class in sed.calibrator.delay) detector_coordiantes_2_k_koordinates() (in module sed.calibrator.momentum)

dictmerge() (in module sed.calibrator.momentum) drop_column() (in module sed.core.dfops) dup (sed.calibrator.energy.EnergyCalibrator property) DuplicateEntryError

E

EnergyCalibrator (class in sed.calibrator.energy)

extract_bias() (in module sed.calibrator.energy) extract_delay_stage_parameters() (in module sed.calibrator.delay)

F

feature_extract() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) feature_select() (sed.calibrator.momentum.MomentumCorrector method) features (sed.calibrator.momentum.MomentumCorrector property) files (sed.core.SedProcessor property) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute)

find_bias_peaks() (sed.core.SedProcessor method) find_correspondence() (in module sed.calibrator.energy) find_nearest() (in module sed.calibrator.energy) fit_energy_calibation() (in module sed.calibrator.energy) FlashLoader (class in sed.loader.flash.loader) forward_fill_lazy() (in module sed.core.dfops) from_dict() (sed.core.metadata.MetaHandler method) from_json() (sed.core.metadata.MetaHandler method) from_nexus() (sed.core.metadata.MetaHandler method)

G

gather_calibration_metadata() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) gather_correction_metadata() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) gather_files() (in module sed.loader.utils) gather_metadata() (sed.loader.mpes.loader.MpesLoader method) generate_inverse_dfield() (in module sed.calibrator.momentum) generate_splinewarp() (sed.core.SedProcessor method) GenericLoader (class in sed.loader.generic.loader) get_attribute() (in module sed.loader.mpes.loader) get_channels_by_format() (sed.loader.flash.loader.FlashLoader method) get_count_rate() (in module sed.loader.mpes.loader) (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method)

get_current_calibration() (sed.calibrator.energy.EnergyCalibrator method) get_elapsed_time() (in module sed.loader.mpes.loader) (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) get_files_from_run_id() (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method) get_groups_and_aliases() (in module sed.loader.mpes.loader) get_loader() (in module sed.loader.loader_interface) get_names_of_all_loaders() (in module sed.loader.loader_interface) get_normalization_histogram() (sed.core.SedProcessor method) get_target_dir() (in module sed.loader.mirrorutil) grid_histogram() (in module sed.diagnostics)

H

hdf5_to_array() (in module sed.loader.mpes.loader) hdf5_to_dataframe() (in module sed.loader.mpes.loader)

hdf5_to_timed_array() (in module sed.loader.mpes.loader) hdf5_to_timed_dataframe() (in module sed.loader.mpes.loader)

I

initialize_paths() (sed.loader.flash.loader.FlashLoader method)

L

load() (sed.core.SedProcessor method) load_bias_series() (sed.core.SedProcessor method) load_config() (in module sed.core.config) load_data() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method) load_dfield() (in module sed.calibrator.momentum)

load_h5() (in module sed.io) load_tiff() (in module sed.io) LOADER (in module sed.loader.base.loader) (in module sed.loader.flash.loader) (in module sed.loader.generic.loader) (in module sed.loader.mpes.loader)

M

map_columns_2d() (in module sed.core.dfops) metadata (sed.core.metadata.MetaHandler property) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) MetaHandler (class in sed.core.metadata) mm_to_ps() (in module sed.calibrator.delay) module sed.binning sed.binning.numba_bin sed.binning.utils sed.calibrator.delay sed.calibrator.energy sed.calibrator.momentum sed.core sed.core.config sed.core.dfops sed.core.metadata sed.diagnostics sed.io sed.loader.base.loader sed.loader.flash.loader sed.loader.generic.loader sed.loader.loader_interface sed.loader.mirrorutil sed.loader.mpes.loader sed.loader.utils

MomentumCorrector (class in sed.calibrator.momentum) MpesLoader (class in sed.loader.mpes.loader) mycopy() (in module sed.loader.mirrorutil) mymakedirs() (in module sed.loader.mirrorutil)

N

normalization_histogram (sed.core.SedProcessor property) normalize() (sed.calibrator.energy.EnergyCalibrator method) normalized (sed.core.SedProcessor property)

normspec() (in module sed.calibrator.energy) nranges (sed.calibrator.energy.EnergyCalibrator property) ntraces (sed.calibrator.energy.EnergyCalibrator property) numba_histogramdd() (in module sed.binning.numba_bin)

O

offset_by_other_columns() (in module sed.core.dfops)

P

parquet_handler() (sed.loader.flash.loader.FlashLoader method) parse_config() (in module sed.core.config) parse_h5_keys() (in module sed.loader.utils) parse_metadata() (sed.loader.flash.loader.FlashLoader method) peakdetect1d() (in module sed.calibrator.energy)

peaksearch() (in module sed.calibrator.energy) plot_single_hist() (in module sed.diagnostics) poly_energy_calibration() (in module sed.calibrator.energy) pose_adjustment() (sed.calibrator.momentum.MomentumCorrector method) (sed.core.SedProcessor method) pre_binning() (sed.core.SedProcessor method)

R

range_convert() (in module sed.calibrator.energy) read_dataframe() (sed.loader.base.loader.BaseLoader method) (sed.loader.flash.loader.FlashLoader method) (sed.loader.generic.loader.GenericLoader method) (sed.loader.mpes.loader.MpesLoader method)

reset_deformation() (sed.calibrator.momentum.MomentumCorrector method) reset_multi_index() (sed.loader.flash.loader.FlashLoader method) runs (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute)

S

save() (sed.core.SedProcessor method) save_config() (in module sed.core.config) save_energy_calibration() (sed.core.SedProcessor method) save_energy_correction() (sed.core.SedProcessor method) save_momentum_calibration() (sed.core.SedProcessor method) save_splinewarp() (sed.core.SedProcessor method) sed.binning module sed.binning.numba_bin module sed.binning.utils module sed.calibrator.delay module sed.calibrator.energy module sed.calibrator.momentum module sed.core module sed.core.config module sed.core.dfops module sed.core.metadata module sed.diagnostics module

sed.io module sed.loader.base.loader module sed.loader.flash.loader module sed.loader.generic.loader module sed.loader.loader_interface module sed.loader.mirrorutil module sed.loader.mpes.loader module sed.loader.utils module SedProcessor (class in sed.core) select_k_range() (sed.calibrator.momentum.MomentumCorrector method) select_slice() (sed.calibrator.momentum.MomentumCorrector method) select_slicer() (sed.calibrator.momentum.MomentumCorrector method) simplify_binning_arguments() (in module sed.binning.utils) size() (sed.loader.mirrorutil.CopyTool method) spline_warp_estimate() (sed.calibrator.momentum.MomentumCorrector method) split_channel_bitwise() (in module sed.loader.utils) supported_file_types (sed.loader.base.loader.BaseLoader attribute) (sed.loader.flash.loader.FlashLoader attribute) (sed.loader.generic.loader.GenericLoader attribute) (sed.loader.mpes.loader.MpesLoader attribute) symscores (sed.calibrator.momentum.MomentumCorrector property)

T

timed_dataframe (sed.core.SedProcessor property) to_dict() (sed.core.metadata.MetaHandler method) to_h5() (in module sed.io) to_json() (sed.core.metadata.MetaHandler method) to_nexus() (in module sed.io) (sed.core.metadata.MetaHandler method)

to_tiff() (in module sed.io) tof2ev() (in module sed.calibrator.energy) tof2evpoly() (in module sed.calibrator.energy) tof2ns() (in module sed.calibrator.energy)

U

update_deformation() (sed.calibrator.momentum.MomentumCorrector method)

V

view() (sed.calibrator.energy.EnergyCalibrator method) (sed.calibrator.momentum.MomentumCorrector method)

view_event_histogram() (sed.core.SedProcessor method)